Identification of gene modules and hub genes associated with Colletotrichum siamense infection in mango using weighted gene co-expression network analysis

Identification of gene modules and hub genes associated with Colletotrichum siamense infection in mango using weighted gene co-expression network analysis

Abstract Colletotrichum siamense is a hemibiotrophic ascomycetous fungus responsible for mango anthracnose. The key genes involved in C. siamense infection remained largely unknown. In this study, we conducted weighted gene co-expression network analysis (WGCNA) of RNA-seq data to mine key genes inv...

Full description

Bibliographic Details
Main Authors: Zongling Liu, Zhengjie Zhu, Yuanhe Huang, Song Nong, Minli Jiang, Sangui Yi, Delong Xie, Hongliu Hu
Format: Article
Language:English
Published: BMC 2023-11-01
Series:BMC Genomics
Subjects:
Weighted gene co-expression network analysis
Transcriptome
Colletotrichum siamense
Hub genes
Effectors
Mango
Online Access:https://doi.org/10.1186/s12864-023-09811-6

Internet

https://doi.org/10.1186/s12864-023-09811-6

Similar Items