SCA: recovering single-cell heterogeneity through information-based dimensionality reduction

Abstract Dimensionality reduction summarizes the complex transcriptomic landscape of single-cell datasets for downstream analyses. Current approaches favor large cellular populations defined by many genes, at the expense of smaller and more subtly defined populations. Here, we present surprisal comp...

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Bibliographic Details
Main Authors: Benjamin DeMeo, Bonnie Berger
Format: Article
Language:English
Published: BMC 2023-08-01
Series:Genome Biology
Online Access:https://doi.org/10.1186/s13059-023-02998-7