ScLSTM: single-cell type detection by siamese recurrent network and hierarchical clustering

ScLSTM: single-cell type detection by siamese recurrent network and hierarchical clustering

Abstract Motivation Categorizing cells into distinct types can shed light on biological tissue functions and interactions, and uncover specific mechanisms under pathological conditions. Since gene expression throughout a population of cells is averaged out by conventional sequencing techniques, it i...

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Bibliographic Details
Main Authors: Hanjing Jiang, Yabing Huang, Qianpeng Li, Boyuan Feng
Format: Article
Language:English
Published: BMC 2023-11-01
Series:BMC Bioinformatics
Subjects:
Single-cell
ScRNA-seq
Siamese LSTM
Cell type detection
Online Access:https://doi.org/10.1186/s12859-023-05494-8

Internet

https://doi.org/10.1186/s12859-023-05494-8

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