Towards predictive computational models of oncolytic virus therapy: basis for experimental validation and model selection.
Oncolytic viruses are viruses that specifically infect cancer cells and kill them, while leaving healthy cells largely intact. Their ability to spread through the tumor makes them an attractive therapy approach. While promising results have been observed in clinical trials, solid success remains elu...
| Main Authors: | , |
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| Format: | Article |
| Language: | English |
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Public Library of Science (PLoS)
2009-01-01
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| Series: | PLoS ONE |
| Online Access: | http://europepmc.org/articles/PMC2629569?pdf=render |
| _version_ | 1828390226109661184 |
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| author | Dominik Wodarz Natalia Komarova |
| author_facet | Dominik Wodarz Natalia Komarova |
| author_sort | Dominik Wodarz |
| collection | DOAJ |
| description | Oncolytic viruses are viruses that specifically infect cancer cells and kill them, while leaving healthy cells largely intact. Their ability to spread through the tumor makes them an attractive therapy approach. While promising results have been observed in clinical trials, solid success remains elusive since we lack understanding of the basic principles that govern the dynamical interactions between the virus and the cancer. In this respect, computational models can help experimental research at optimizing treatment regimes. Although preliminary mathematical work has been performed, this suffers from the fact that individual models are largely arbitrary and based on biologically uncertain assumptions. Here, we present a general framework to study the dynamics of oncolytic viruses that is independent of uncertain and arbitrary mathematical formulations. We find two categories of dynamics, depending on the assumptions about spatial constraints that govern that spread of the virus from cell to cell. If infected cells are mixed among uninfected cells, there exists a viral replication rate threshold beyond which tumor control is the only outcome. On the other hand, if infected cells are clustered together (e.g. in a solid tumor), then we observe more complicated dynamics in which the outcome of therapy might go either way, depending on the initial number of cells and viruses. We fit our models to previously published experimental data and discuss aspects of model validation, selection, and experimental design. This framework can be used as a basis for model selection and validation in the context of future, more detailed experimental studies. It can further serve as the basis for future, more complex models that take into account other clinically relevant factors such as immune responses. |
| first_indexed | 2024-12-10T06:40:28Z |
| format | Article |
| id | doaj.art-b34434aa7c2d4ff4bef54cea15fab1d2 |
| institution | Directory Open Access Journal |
| issn | 1932-6203 |
| language | English |
| last_indexed | 2024-12-10T06:40:28Z |
| publishDate | 2009-01-01 |
| publisher | Public Library of Science (PLoS) |
| record_format | Article |
| series | PLoS ONE |
| spelling | doaj.art-b34434aa7c2d4ff4bef54cea15fab1d22022-12-22T01:58:48ZengPublic Library of Science (PLoS)PLoS ONE1932-62032009-01-0141e427110.1371/journal.pone.0004271Towards predictive computational models of oncolytic virus therapy: basis for experimental validation and model selection.Dominik WodarzNatalia KomarovaOncolytic viruses are viruses that specifically infect cancer cells and kill them, while leaving healthy cells largely intact. Their ability to spread through the tumor makes them an attractive therapy approach. While promising results have been observed in clinical trials, solid success remains elusive since we lack understanding of the basic principles that govern the dynamical interactions between the virus and the cancer. In this respect, computational models can help experimental research at optimizing treatment regimes. Although preliminary mathematical work has been performed, this suffers from the fact that individual models are largely arbitrary and based on biologically uncertain assumptions. Here, we present a general framework to study the dynamics of oncolytic viruses that is independent of uncertain and arbitrary mathematical formulations. We find two categories of dynamics, depending on the assumptions about spatial constraints that govern that spread of the virus from cell to cell. If infected cells are mixed among uninfected cells, there exists a viral replication rate threshold beyond which tumor control is the only outcome. On the other hand, if infected cells are clustered together (e.g. in a solid tumor), then we observe more complicated dynamics in which the outcome of therapy might go either way, depending on the initial number of cells and viruses. We fit our models to previously published experimental data and discuss aspects of model validation, selection, and experimental design. This framework can be used as a basis for model selection and validation in the context of future, more detailed experimental studies. It can further serve as the basis for future, more complex models that take into account other clinically relevant factors such as immune responses.http://europepmc.org/articles/PMC2629569?pdf=render |
| spellingShingle | Dominik Wodarz Natalia Komarova Towards predictive computational models of oncolytic virus therapy: basis for experimental validation and model selection. PLoS ONE |
| title | Towards predictive computational models of oncolytic virus therapy: basis for experimental validation and model selection. |
| title_full | Towards predictive computational models of oncolytic virus therapy: basis for experimental validation and model selection. |
| title_fullStr | Towards predictive computational models of oncolytic virus therapy: basis for experimental validation and model selection. |
| title_full_unstemmed | Towards predictive computational models of oncolytic virus therapy: basis for experimental validation and model selection. |
| title_short | Towards predictive computational models of oncolytic virus therapy: basis for experimental validation and model selection. |
| title_sort | towards predictive computational models of oncolytic virus therapy basis for experimental validation and model selection |
| url | http://europepmc.org/articles/PMC2629569?pdf=render |
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