Integration analysis of PacBio SMRT- and Illumina RNA-seq reveals candidate genes and pathway involved in selenium metabolism in hyperaccumulator Cardamine violifolia

Integration analysis of PacBio SMRT- and Illumina RNA-seq reveals candidate genes and pathway involved in selenium metabolism in hyperaccumulator Cardamine violifolia

Abstract Background Cardamine violifolia, native to China, is one of the selenium (Se) hyperaccumulators. The mechanism of Se metabolism and tolerance remains unclear, and only limited genetic information is currently available. Therefore, we combined a PacBio single-molecule real-time (SMRT) transc...

Full description

Bibliographic Details
Main Authors: Shen Rao, Tian Yu, Xin Cong, Feng Xu, Xiaozhuo Lai, Weiwei Zhang, Yongling Liao, Shuiyuan Cheng
Format: Article
Language:English
Published: BMC 2020-10-01
Series:BMC Plant Biology
Subjects:
Cardamine violifolia
Full-length transcriptome
lncRNA
RNA-seq
Selenium metabolism
Selenate treatment
Online Access:http://link.springer.com/article/10.1186/s12870-020-02694-9

Internet

http://link.springer.com/article/10.1186/s12870-020-02694-9

Similar Items