scGPS: Determining Cell States and Global Fate Potential of Subpopulations

scGPS: Determining Cell States and Global Fate Potential of Subpopulations

Finding cell states and their transcriptional relatedness is a main outcome from analysing single-cell data. In developmental biology, determining whether cells are related in a differentiation lineage remains a major challenge. A seamless analysis pipeline from cell clustering to estimating the pro...

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Bibliographic Details
Main Authors: Michael Thompson, Maika Matsumoto, Tianqi Ma, Anne Senabouth, Nathan J. Palpant, Joseph E. Powell, Quan Nguyen
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-07-01
Series:Frontiers in Genetics
Subjects:
single cell
machine learning
clustering
trajectory analysis
cell fate
Online Access:https://www.frontiersin.org/articles/10.3389/fgene.2021.666771/full

Internet

https://www.frontiersin.org/articles/10.3389/fgene.2021.666771/full

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