clustifyr: an R package for automated single-cell RNA sequencing cluster classification [version 2; peer review: 2 approved]

Assignment of cell types from single-cell RNA sequencing (scRNA-seq) data remains a time-consuming and error-prone process. Current packages for identity assignment use limited types of reference data and often have rigid data structure requirements. We developed the clustifyr R package to leverage...

Full description

Bibliographic Details
Main Authors: Rui Fu, Austin E. Gillen, Ryan M. Sheridan, Chengzhe Tian, Michelle Daya, Yue Hao, Jay R. Hesselberth, Kent A. Riemondy
Format: Article
Language:English
Published: F1000 Research Ltd 2020-07-01
Series:F1000Research
Online Access:https://f1000research.com/articles/9-223/v2