Integrated Meta-omics Reveals a Fungus-Associated Bacteriome and Distinct Functional Pathways in <named-content content-type="genus-species">Clostridioides difficile</named-content> Infection

Integrated Meta-omics Reveals a Fungus-Associated Bacteriome and Distinct Functional Pathways in <named-content content-type="genus-species">Clostridioides difficile</named-content> Infection

ABSTRACT There has been no prior application of matched metagenomics and metatranscriptomics in Clostridioides difficile infection (CDI) evaluating the role of fungi in CDI or identifying community functions that contribute to the development of this disease. We collected diarrheal stools from 49 in...

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Bibliographic Details
Main Authors: David B. Stewart, Justin R. Wright, Maria Fowler, Christopher J. McLimans, Vasily Tokarev, Isabella Amaniera, Owen Baker, Hoi-Tong Wong, Jeff Brabec, Rebecca Drucker, Regina Lamendella
Format: Article
Language:English
Published: American Society for Microbiology 2019-08-01
Series:mSphere
Subjects:
Clostridioides difficile
metagenomics
metatranscriptomics
microbiome
mycobiome
Online Access:https://journals.asm.org/doi/10.1128/mSphere.00454-19

Internet

https://journals.asm.org/doi/10.1128/mSphere.00454-19

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