Selective sorting of microRNAs into exosomes by phase-separated YBX1 condensates

Exosomes may mediate cell-to-cell communication by transporting various proteins and nucleic acids to neighboring cells. Some protein and RNA cargoes are significantly enriched in exosomes. How cells efficiently and selectively sort them into exosomes remains incompletely explored. Previously, we re...

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Main Authors: Xiao-Man Liu, Liang Ma, Randy Schekman
Format: Article
Language:English
Published: eLife Sciences Publications Ltd 2021-11-01
Series:eLife
Subjects:
Online Access:https://elifesciences.org/articles/71982
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author Xiao-Man Liu
Liang Ma
Randy Schekman
author_facet Xiao-Man Liu
Liang Ma
Randy Schekman
author_sort Xiao-Man Liu
collection DOAJ
description Exosomes may mediate cell-to-cell communication by transporting various proteins and nucleic acids to neighboring cells. Some protein and RNA cargoes are significantly enriched in exosomes. How cells efficiently and selectively sort them into exosomes remains incompletely explored. Previously, we reported that YBX1 is required in sorting of miR-223 into exosomes. Here, we show that YBX1 undergoes liquid-liquid phase separation (LLPS) in vitro and in cells. YBX1 condensates selectively recruit miR-223 in vitro and into exosomes secreted by cultured cells. Point mutations that inhibit YBX1 phase separation impair the incorporation of YBX1 protein into biomolecular condensates formed in cells, and perturb miR-233 sorting into exosomes. We propose that phase separation-mediated local enrichment of cytosolic RNA-binding proteins and their cognate RNAs enables their targeting and packaging by vesicles that bud into multivesicular bodies. This provides a possible mechanism for efficient and selective engulfment of cytosolic proteins and RNAs into intraluminal vesicles which are then secreted as exosomes from cells.
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spelling doaj.art-bbf999da97cc49788361cf2fe91973c52022-12-22T03:37:56ZengeLife Sciences Publications LtdeLife2050-084X2021-11-011010.7554/eLife.71982Selective sorting of microRNAs into exosomes by phase-separated YBX1 condensatesXiao-Man Liu0https://orcid.org/0000-0001-9968-3988Liang Ma1Randy Schekman2https://orcid.org/0000-0001-8615-6409Department of Molecular and Cell Biology, Howard Hughes Medical Institute, University of California, Berkeley, Berkeley, United StatesDepartment of Molecular and Cell Biology, Howard Hughes Medical Institute, University of California, Berkeley, Berkeley, United StatesDepartment of Molecular and Cell Biology, Howard Hughes Medical Institute, University of California, Berkeley, Berkeley, United StatesExosomes may mediate cell-to-cell communication by transporting various proteins and nucleic acids to neighboring cells. Some protein and RNA cargoes are significantly enriched in exosomes. How cells efficiently and selectively sort them into exosomes remains incompletely explored. Previously, we reported that YBX1 is required in sorting of miR-223 into exosomes. Here, we show that YBX1 undergoes liquid-liquid phase separation (LLPS) in vitro and in cells. YBX1 condensates selectively recruit miR-223 in vitro and into exosomes secreted by cultured cells. Point mutations that inhibit YBX1 phase separation impair the incorporation of YBX1 protein into biomolecular condensates formed in cells, and perturb miR-233 sorting into exosomes. We propose that phase separation-mediated local enrichment of cytosolic RNA-binding proteins and their cognate RNAs enables their targeting and packaging by vesicles that bud into multivesicular bodies. This provides a possible mechanism for efficient and selective engulfment of cytosolic proteins and RNAs into intraluminal vesicles which are then secreted as exosomes from cells.https://elifesciences.org/articles/71982phase separationexosomesmiRNAYBX1P-bodies
spellingShingle Xiao-Man Liu
Liang Ma
Randy Schekman
Selective sorting of microRNAs into exosomes by phase-separated YBX1 condensates
eLife
phase separation
exosomes
miRNA
YBX1
P-bodies
title Selective sorting of microRNAs into exosomes by phase-separated YBX1 condensates
title_full Selective sorting of microRNAs into exosomes by phase-separated YBX1 condensates
title_fullStr Selective sorting of microRNAs into exosomes by phase-separated YBX1 condensates
title_full_unstemmed Selective sorting of microRNAs into exosomes by phase-separated YBX1 condensates
title_short Selective sorting of microRNAs into exosomes by phase-separated YBX1 condensates
title_sort selective sorting of micrornas into exosomes by phase separated ybx1 condensates
topic phase separation
exosomes
miRNA
YBX1
P-bodies
url https://elifesciences.org/articles/71982
work_keys_str_mv AT xiaomanliu selectivesortingofmicrornasintoexosomesbyphaseseparatedybx1condensates
AT liangma selectivesortingofmicrornasintoexosomesbyphaseseparatedybx1condensates
AT randyschekman selectivesortingofmicrornasintoexosomesbyphaseseparatedybx1condensates