A fast and efficient algorithm for DNA sequence similarity identification

A fast and efficient algorithm for DNA sequence similarity identification

Abstract DNA sequence similarity analysis is necessary for enormous purposes including genome analysis, extracting biological information, finding the evolutionary relationship of species. There are two types of sequence analysis which are alignment-based (AB) and alignment-free (AF). AB is effectiv...

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Bibliographic Details
Main Authors: Machbah Uddin, Mohammad Khairul Islam, Md. Rakib Hassan, Farah Jahan, Joong Hwan Baek
Format: Article
Language:English
Published: Springer 2022-08-01
Series:Complex & Intelligent Systems
Subjects:
DNA sequence similarity
Dynamic k - $$k-mer$$ k - m e r
Matrix shrinking
AFproject
Benchmark dataset
Bioinformatics engineering
Online Access:https://doi.org/10.1007/s40747-022-00846-y

Internet

https://doi.org/10.1007/s40747-022-00846-y

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