LABKIT: Labeling and Segmentation Toolkit for Big Image Data

LABKIT: Labeling and Segmentation Toolkit for Big Image Data

We present LABKIT, a user-friendly Fiji plugin for the segmentation of microscopy image data. It offers easy to use manual and automated image segmentation routines that can be rapidly applied to single- and multi-channel images as well as to timelapse movies in 2D or 3D. LABKIT is specifically desi...

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Bibliographic Details
Main Authors: Matthias Arzt, Joran Deschamps, Christopher Schmied, Tobias Pietzsch, Deborah Schmidt, Pavel Tomancak, Robert Haase, Florian Jug
Format: Article
Language:English
Published: Frontiers Media S.A. 2022-02-01
Series:Frontiers in Computer Science
Subjects:
segmentation
labeling
machine learning
random forest
Fiji
open-source
Online Access:https://www.frontiersin.org/articles/10.3389/fcomp.2022.777728/full

Internet

https://www.frontiersin.org/articles/10.3389/fcomp.2022.777728/full

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