EasyCGTree: a pipeline for prokaryotic phylogenomic analysis based on core gene sets

EasyCGTree: a pipeline for prokaryotic phylogenomic analysis based on core gene sets

Abstract Background Genome-scale phylogenetic analysis based on core gene sets is routinely used in microbiological research. However, the techniques are still not approachable for individuals with little bioinformatics experience. Here, we present EasyCGTree, a user-friendly and cross-platform pipe...

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Bibliographic Details
Main Authors: Dao-Feng Zhang, Wei He, Zongze Shao, Iftikhar Ahmed, Yuqin Zhang, Wen-Jun Li, Zhe Zhao
Format: Article
Language:English
Published: BMC 2023-10-01
Series:BMC Bioinformatics
Subjects:
Phylogeny inference
Supermatrix
Supertree
Prokaryote taxonomy
Core gene
Online Access:https://doi.org/10.1186/s12859-023-05527-2

Internet

https://doi.org/10.1186/s12859-023-05527-2

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