Glycan Degradation (GlyDeR) Analysis Predicts Mammalian Gut Microbiota Abundance and Host Diet-Specific Adaptations
ABSTRACT Glycans form the primary nutritional source for microbes in the human gut, and understanding their metabolism is a critical yet understudied aspect of microbiome research. Here, we present a novel computational pipeline for modeling glycan degradation (GlyDeR) which predicts the glycan degr...
Auteurs principaux: | Omer Eilam, Raphy Zarecki, Matthew Oberhardt, Luke K. Ursell, Martin Kupiec, Rob Knight, Uri Gophna, Eytan Ruppin |
---|---|
Format: | Article |
Langue: | English |
Publié: |
American Society for Microbiology
2014-08-01
|
Collection: | mBio |
Accès en ligne: | https://journals.asm.org/doi/10.1128/mBio.01526-14 |
Documents similaires
-
A novel nutritional predictor links microbial fastidiousness with lowered ubiquity, growth rate, and cooperativeness.
par: Raphy Zarecki, et autres
Publié: (2014-07-01) -
Maximal sum of metabolic exchange fluxes outperforms biomass yield as a predictor of growth rate of microorganisms.
par: Raphy Zarecki, et autres
Publié: (2014-01-01) -
Systems-Wide Prediction of Enzyme Promiscuity Reveals a New Underground Alternative Route for Pyridoxal 5'-Phosphate Production in E. coli.
par: Matthew A Oberhardt, et autres
Publié: (2016-01-01) -
Determinants of protein abundance and translation efficiency in S. cerevisiae.
par: Tamir Tuller, et autres
Publié: (2007-12-01) -
Decoupling Environment-Dependent and Independent Genetic Robustness across Bacterial Species.
par: Shiri Freilich, et autres
Publié: (2010-02-01)