MICADo - Looking for mutations in targeted PacBio cancer data: an alignment-free method

MICADo - Looking for mutations in targeted PacBio cancer data: an alignment-free method

Targeted sequencing is commonly used in clinical application of NGS technology since it enables generation of sufficient sequencing depth in the targeted genes of interest and thus ensures the best possible downstream analysis. This notwithstanding, the accurate discovery and annotation of disease c...

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Bibliographic Details
Main Authors: Justine Rudewicz, Hayssam Soueidan, Raluca Uricaru, Hervé Bonnefoi, Richard Iggo, Jonas Bergh, Macha Nikolski
Format: Article
Language:English
Published: Frontiers Media S.A. 2016-12-01
Series:Frontiers in Genetics
Subjects:
Cancer
targeted sequencing
third generation sequencing
De Bruijn graphs
Code:Python
patients’ cohort
Online Access:http://journal.frontiersin.org/Journal/10.3389/fgene.2016.00214/full

Internet

http://journal.frontiersin.org/Journal/10.3389/fgene.2016.00214/full

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