Hidden Markov models for evolution and comparative genomics analysis.

The problem of reconstruction of ancestral states given a phylogeny and data from extant species arises in a wide range of biological studies. The continuous-time Markov model for the discrete states evolution is generally used for the reconstruction of ancestral states. We modify this model to acco...

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Bibliographic Details
Main Authors: Nadezda A Bykova, Alexander V Favorov, Andrey A Mironov
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2013-01-01
Series:PLoS ONE
Online Access:http://europepmc.org/articles/PMC3676395?pdf=render