rRNA transcription is integral to phase separation and maintenance of nucleolar structure.

Transcription of ribosomal RNA (rRNA) by RNA Polymerase (Pol) I in the nucleolus is necessary for ribosome biogenesis, which is intimately tied to cell growth and proliferation. Perturbation of ribosome biogenesis results in tissue specific disorders termed ribosomopathies in association with altera...

Full description

Bibliographic Details
Main Authors: Soma Dash, Maureen C Lamb, Jeffrey J Lange, Mary C McKinney, Dai Tsuchiya, Fengli Guo, Xia Zhao, Timothy J Corbin, MaryEllen Kirkman, Kym Delventhal, Emma L Moore, Sean McKinney, Rita Shiang, Paul A Trainor
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2023-08-01
Series:PLoS Genetics
Online Access:https://journals.plos.org/plosgenetics/article/file?id=10.1371/journal.pgen.1010854&type=printable
_version_ 1797667866650083328
author Soma Dash
Maureen C Lamb
Jeffrey J Lange
Mary C McKinney
Dai Tsuchiya
Fengli Guo
Xia Zhao
Timothy J Corbin
MaryEllen Kirkman
Kym Delventhal
Emma L Moore
Sean McKinney
Rita Shiang
Paul A Trainor
author_facet Soma Dash
Maureen C Lamb
Jeffrey J Lange
Mary C McKinney
Dai Tsuchiya
Fengli Guo
Xia Zhao
Timothy J Corbin
MaryEllen Kirkman
Kym Delventhal
Emma L Moore
Sean McKinney
Rita Shiang
Paul A Trainor
author_sort Soma Dash
collection DOAJ
description Transcription of ribosomal RNA (rRNA) by RNA Polymerase (Pol) I in the nucleolus is necessary for ribosome biogenesis, which is intimately tied to cell growth and proliferation. Perturbation of ribosome biogenesis results in tissue specific disorders termed ribosomopathies in association with alterations in nucleolar structure. However, how rRNA transcription and ribosome biogenesis regulate nucleolar structure during normal development and in the pathogenesis of disease remains poorly understood. Here we show that homozygous null mutations in Pol I subunits required for rRNA transcription and ribosome biogenesis lead to preimplantation lethality. Moreover, we discovered that Polr1a-/-, Polr1b-/-, Polr1c-/- and Polr1d-/- mutants exhibit defects in the structure of their nucleoli, as evidenced by a decrease in number of nucleolar precursor bodies and a concomitant increase in nucleolar volume, which results in a single condensed nucleolus. Pharmacological inhibition of Pol I in preimplantation and midgestation embryos, as well as in hiPSCs, similarly results in a single condensed nucleolus or fragmented nucleoli. We find that when Pol I function and rRNA transcription is inhibited, the viscosity of the granular compartment of the nucleolus increases, which disrupts its phase separation properties, leading to a single condensed nucleolus. However, if a cell progresses through mitosis, the absence of rRNA transcription prevents reassembly of the nucleolus and manifests as fragmented nucleoli. Taken together, our data suggests that Pol I function and rRNA transcription are required for maintaining nucleolar structure and integrity during development and in the pathogenesis of disease.
first_indexed 2024-03-11T20:20:46Z
format Article
id doaj.art-c037fb36df1941e8ad84f0aefebb0c85
institution Directory Open Access Journal
issn 1553-7390
1553-7404
language English
last_indexed 2024-03-11T20:20:46Z
publishDate 2023-08-01
publisher Public Library of Science (PLoS)
record_format Article
series PLoS Genetics
spelling doaj.art-c037fb36df1941e8ad84f0aefebb0c852023-10-03T05:31:11ZengPublic Library of Science (PLoS)PLoS Genetics1553-73901553-74042023-08-01198e101085410.1371/journal.pgen.1010854rRNA transcription is integral to phase separation and maintenance of nucleolar structure.Soma DashMaureen C LambJeffrey J LangeMary C McKinneyDai TsuchiyaFengli GuoXia ZhaoTimothy J CorbinMaryEllen KirkmanKym DelventhalEmma L MooreSean McKinneyRita ShiangPaul A TrainorTranscription of ribosomal RNA (rRNA) by RNA Polymerase (Pol) I in the nucleolus is necessary for ribosome biogenesis, which is intimately tied to cell growth and proliferation. Perturbation of ribosome biogenesis results in tissue specific disorders termed ribosomopathies in association with alterations in nucleolar structure. However, how rRNA transcription and ribosome biogenesis regulate nucleolar structure during normal development and in the pathogenesis of disease remains poorly understood. Here we show that homozygous null mutations in Pol I subunits required for rRNA transcription and ribosome biogenesis lead to preimplantation lethality. Moreover, we discovered that Polr1a-/-, Polr1b-/-, Polr1c-/- and Polr1d-/- mutants exhibit defects in the structure of their nucleoli, as evidenced by a decrease in number of nucleolar precursor bodies and a concomitant increase in nucleolar volume, which results in a single condensed nucleolus. Pharmacological inhibition of Pol I in preimplantation and midgestation embryos, as well as in hiPSCs, similarly results in a single condensed nucleolus or fragmented nucleoli. We find that when Pol I function and rRNA transcription is inhibited, the viscosity of the granular compartment of the nucleolus increases, which disrupts its phase separation properties, leading to a single condensed nucleolus. However, if a cell progresses through mitosis, the absence of rRNA transcription prevents reassembly of the nucleolus and manifests as fragmented nucleoli. Taken together, our data suggests that Pol I function and rRNA transcription are required for maintaining nucleolar structure and integrity during development and in the pathogenesis of disease.https://journals.plos.org/plosgenetics/article/file?id=10.1371/journal.pgen.1010854&type=printable
spellingShingle Soma Dash
Maureen C Lamb
Jeffrey J Lange
Mary C McKinney
Dai Tsuchiya
Fengli Guo
Xia Zhao
Timothy J Corbin
MaryEllen Kirkman
Kym Delventhal
Emma L Moore
Sean McKinney
Rita Shiang
Paul A Trainor
rRNA transcription is integral to phase separation and maintenance of nucleolar structure.
PLoS Genetics
title rRNA transcription is integral to phase separation and maintenance of nucleolar structure.
title_full rRNA transcription is integral to phase separation and maintenance of nucleolar structure.
title_fullStr rRNA transcription is integral to phase separation and maintenance of nucleolar structure.
title_full_unstemmed rRNA transcription is integral to phase separation and maintenance of nucleolar structure.
title_short rRNA transcription is integral to phase separation and maintenance of nucleolar structure.
title_sort rrna transcription is integral to phase separation and maintenance of nucleolar structure
url https://journals.plos.org/plosgenetics/article/file?id=10.1371/journal.pgen.1010854&type=printable
work_keys_str_mv AT somadash rrnatranscriptionisintegraltophaseseparationandmaintenanceofnucleolarstructure
AT maureenclamb rrnatranscriptionisintegraltophaseseparationandmaintenanceofnucleolarstructure
AT jeffreyjlange rrnatranscriptionisintegraltophaseseparationandmaintenanceofnucleolarstructure
AT marycmckinney rrnatranscriptionisintegraltophaseseparationandmaintenanceofnucleolarstructure
AT daitsuchiya rrnatranscriptionisintegraltophaseseparationandmaintenanceofnucleolarstructure
AT fengliguo rrnatranscriptionisintegraltophaseseparationandmaintenanceofnucleolarstructure
AT xiazhao rrnatranscriptionisintegraltophaseseparationandmaintenanceofnucleolarstructure
AT timothyjcorbin rrnatranscriptionisintegraltophaseseparationandmaintenanceofnucleolarstructure
AT maryellenkirkman rrnatranscriptionisintegraltophaseseparationandmaintenanceofnucleolarstructure
AT kymdelventhal rrnatranscriptionisintegraltophaseseparationandmaintenanceofnucleolarstructure
AT emmalmoore rrnatranscriptionisintegraltophaseseparationandmaintenanceofnucleolarstructure
AT seanmckinney rrnatranscriptionisintegraltophaseseparationandmaintenanceofnucleolarstructure
AT ritashiang rrnatranscriptionisintegraltophaseseparationandmaintenanceofnucleolarstructure
AT paulatrainor rrnatranscriptionisintegraltophaseseparationandmaintenanceofnucleolarstructure