DeepDoublet identifies neighboring cell-dependent gene expression

Abstract Cells interact with each other for proper function and homeostasis. Often, co-expression of ligand-receptor pairs from the single-cell RNAseq (scRNAseq) has been used to identify interacting cell types. Recently, RNA sequencing of physically interacting multi-cells has been used to identify...

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Bibliographic Details
Main Authors: Linbu Liao, Junyoung Kim, Kanghee Cho, Junil Kim, Byung-Kwan Lim, Kyoung Jae Won
Format: Article
Language:English
Published: Korea Genome Organization 2024-12-01
Series:Genomics & Informatics
Subjects:
Online Access:https://doi.org/10.1186/s44342-024-00031-2