A linkage disequilibrium-based approach to position unmapped SNPs in crop species

A linkage disequilibrium-based approach to position unmapped SNPs in crop species

Abstract Background High-density SNP arrays are now available for a wide range of crop species. Despite the development of many tools for generating genetic maps, the genome position of many SNPs from these arrays is unknown. Here we propose a linkage disequilibrium (LD)-based algorithm to allocate...

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Bibliographic Details
Main Authors: Seema Yadav, Elizabeth M. Ross, Karen S. Aitken, Lee T. Hickey, Owen Powell, Xianming Wei, Kai P. Voss-Fels, Ben J. Hayes
Format: Article
Language:English
Published: BMC 2021-10-01
Series:BMC Genomics
Subjects:
Genetic map
Linkage disequilibrium
Single nucleotide polymorphism
Online Access:https://doi.org/10.1186/s12864-021-08116-w

Internet

https://doi.org/10.1186/s12864-021-08116-w

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