HiCImpute: A Bayesian hierarchical model for identifying structural zeros and enhancing single cell Hi-C data.

Single cell Hi-C techniques enable one to study cell to cell variability in chromatin interactions. However, single cell Hi-C (scHi-C) data suffer severely from sparsity, that is, the existence of excess zeros due to insufficient sequencing depth. Complicating the matter further is the fact that not...

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Bibliographic Details
Main Authors: Qing Xie, Chenggong Han, Victor Jin, Shili Lin
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2022-06-01
Series:PLoS Computational Biology
Online Access:https://doi.org/10.1371/journal.pcbi.1010129