HiCDiffusion - diffusion-enhanced, transformer-based prediction of chromatin interactions from DNA sequences

Abstract Prediction of chromatin interactions from DNA sequence has been a significant research challenge in the last couple of years. Several solutions have been proposed, most of which are based on encoder-decoder architecture, where 1D sequence is convoluted, encoded into the latent representatio...

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Bibliographic Details
Main Authors: Mateusz Chiliński, Dariusz Plewczynski
Format: Article
Language:English
Published: BMC 2024-10-01
Series:BMC Genomics
Subjects:
Online Access:https://doi.org/10.1186/s12864-024-10885-z