DecOT: Bulk Deconvolution With Optimal Transport Loss Using a Single-Cell Reference

Tissues are constituted of heterogeneous cell types. Although single-cell RNA sequencing has paved the way to a deeper understanding of organismal cellular composition, the high cost and technical noise have prevented its wide application. As an alternative, computational deconvolution of bulk tissu...

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Bibliographic Details
Main Authors: Gan Liu, Xiuqin Liu, Liang Ma
Format: Article
Language:English
Published: Frontiers Media S.A. 2022-02-01
Series:Frontiers in Genetics
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fgene.2022.825896/full