Evaluation of whole and core genome multilocus sequence typing allele schemes for Salmonella enterica outbreak detection in a national surveillance network, PulseNet USA

Evaluation of whole and core genome multilocus sequence typing allele schemes for Salmonella enterica outbreak detection in a national surveillance network, PulseNet USA

Salmonella enterica is a leading cause of bacterial foodborne and zoonotic illnesses in the United States. For this study, we applied four different whole genome sequencing (WGS)-based subtyping methods: high quality single-nucleotide polymorphism (hqSNP) analysis, whole genome multilocus sequence t...

पूर्ण विवरण

ग्रंथसूची विवरण
मुख्य लेखकों: Molly M. Leeper, Beth M. Tolar, Taylor Griswold, Eshaw Vidyaprakash, Kelley B. Hise, Grant M. Williams, Sung B. Im, Jessica C. Chen, Hannes Pouseele, Heather A. Carleton
स्वरूप: लेख
भाषा:English
प्रकाशित: Frontiers Media S.A. 2023-09-01
श्रृंखला:Frontiers in Microbiology
विषय:
Salmonella
cgMLST
wgMLST
hqSNP
surveillance
epidemiology
ऑनलाइन पहुंच:https://www.frontiersin.org/articles/10.3389/fmicb.2023.1254777/full

इंटरनेट

https://www.frontiersin.org/articles/10.3389/fmicb.2023.1254777/full

समान संसाधन