Comparison of gene clustering criteria reveals intrinsic uncertainty in pangenome analyses
Abstract Background A key step for comparative genomics is to group open reading frames into functionally and evolutionarily meaningful gene clusters. Gene clustering is complicated by intraspecific duplications and horizontal gene transfers that are frequent in prokaryotes. In consequence, gene clu...
Main Authors: | Saioa Manzano-Morales, Yang Liu, Sara González-Bodí, Jaime Huerta-Cepas, Jaime Iranzo |
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Format: | Article |
Language: | English |
Published: |
BMC
2023-10-01
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Series: | Genome Biology |
Subjects: | |
Online Access: | https://doi.org/10.1186/s13059-023-03089-3 |
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