SEMplMe: a tool for integrating DNA methylation effects in transcription factor binding affinity predictions

Abstract Motivation Aberrant DNA methylation in transcription factor binding sites has been shown to lead to anomalous gene regulation that is strongly associated with human disease. However, the majority of methylation-sensitive positions within transcription factor binding sites remain unknown. He...

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Bibliographic Details
Main Authors: Sierra S. Nishizaki, Alan P. Boyle
Format: Article
Language:English
Published: BMC 2022-08-01
Series:BMC Bioinformatics
Subjects:
Online Access:https://doi.org/10.1186/s12859-022-04865-x