Genome-wide divergence and linkage disequilibrium analyses for Capsicum baccatum revealed by genome-anchored single nucleotide polymorphisms

Genome-wide divergence and linkage disequilibrium analyses for Capsicum baccatum revealed by genome-anchored single nucleotide polymorphisms

Principal component analysis (PCA) with 36,621 polymorphic genome-anchored single nucleotide polymorphisms (SNPs) identified collectively for Capsicum annuum and Capsicum baccatum was used to show the distribution of these 2 important incompatible cultivated pepper species. Estimated mean nucleotide...

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Bibliographic Details
Main Authors: Padma Nimmakayala, Venkata Lakshmi Abburi, Thangasamy Saminathan, Aldo Almeida, Brittany Davenport, Joshua Davidson, Chandra Mohan Reddy, Gerald Hankins, Andreas Ebert, Doil Choi, John Stommel, Umesh K Reddy
Format: Article
Language:English
Published: Frontiers Media S.A. 2016-11-01
Series:Frontiers in Plant Science
Subjects:
Linkage Disequilibrium
population structure
Genome-wide association mapping
Capsicum baccatum
Peduncle length
Genotyping by sequencing
Online Access:http://journal.frontiersin.org/Journal/10.3389/fpls.2016.01646/full

Internet

http://journal.frontiersin.org/Journal/10.3389/fpls.2016.01646/full

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