OGRE: calculate, visualize, and analyze overlap between genomic input regions and public annotations

OGRE: calculate, visualize, and analyze overlap between genomic input regions and public annotations

Abstract Background Modern genome sequencing leads to an ever-growing collection of genomic annotations. Combining these elements with a set of input regions (e.g. genes) would yield new insights in genomic associations, such as those involved in gene regulation. The required data are scattered acro...

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Bibliographic Details
Main Authors: Sven Berres, Jörg Gromoll, Marius Wöste, Sarah Sandmann, Sandra Laurentino
Format: Article
Language:English
Published: BMC 2023-07-01
Series:BMC Bioinformatics
Subjects:
Annotation
Genomic association
Genomic regions
Omics
Overlap
Regulatory elements
Online Access:https://doi.org/10.1186/s12859-023-05422-w

Internet

https://doi.org/10.1186/s12859-023-05422-w

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