Detection of single nucleotide polymorphisms in virus genomes assembled from high-throughput sequencing data: large-scale performance testing of sequence analysis strategies

Detection of single nucleotide polymorphisms in virus genomes assembled from high-throughput sequencing data: large-scale performance testing of sequence analysis strategies

Recent developments in high-throughput sequencing (HTS) technologies and bioinformatics have drastically changed research in virology, especially for virus discovery. Indeed, proper monitoring of the viral population requires information on the different isolates circulating in the studied area. For...

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Bibliographic Details
Main Authors: Johan Rollin, Rachelle Bester, Yves Brostaux, Kadriye Caglayan, Kris De Jonghe, Ales Eichmeier, Yoika Foucart, Annelies Haegeman, Igor Koloniuk, Petr Kominek, Hans Maree, Serkan Onder, Susana Posada Céspedes, Vahid Roumi, Dana Šafářová, Olivier Schumpp, Cigdem Ulubas Serce, Merike Sõmera, Lucie Tamisier, Eeva Vainio, Rene AA van der Vlugt, Sebastien Massart
Format: Article
Language:English
Published: PeerJ Inc. 2023-08-01
Series:PeerJ
Subjects:
Bioinformatic
Genomic
Virus
Plant
Variant
Online Access:https://peerj.com/articles/15816.pdf

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https://peerj.com/articles/15816.pdf

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