An optimized thermodynamics integration protocol for identifying beneficial mutations in antibody design

Accurate identification of beneficial mutations is central to antibody design. Many knowledge-based (KB) computational approaches have been developed to predict beneficial mutations, but their accuracy leaves room for improvement. Thermodynamic integration (TI) is an alchemical free energy algorithm...

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Bibliographic Details
Main Authors: Zizhang Sheng, Jude S. Bimela, Maple Wang, Zhiteng Li, Yicheng Guo, David D. Ho
Format: Article
Language:English
Published: Frontiers Media S.A. 2023-05-01
Series:Frontiers in Immunology
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fimmu.2023.1190416/full