Exclusion and Genomic Relatedness Methods for Assignment of Parentage Using Genotyping-by-Sequencing Data

Exclusion and Genomic Relatedness Methods for Assignment of Parentage Using Genotyping-by-Sequencing Data

Genotypes are often used to assign parentage in agricultural and ecological settings. Sequencing can be used to obtain genotypes but does not provide unambiguous genotype calls, especially when sequencing depth is low in order to reduce costs. In that case, standard parentage analysis methods no lon...

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Bibliographic Details
Main Authors: Ken G. Dodds, John C. McEwan, Rudiger Brauning, Tracey C. van Stijn, Suzanne J. Rowe, K. Mary McEwan, Shannon M. Clarke
Format: Article
Language:English
Published: Oxford University Press 2019-10-01
Series:G3: Genes, Genomes, Genetics
Subjects:
parentage
genotyping-by-sequencing
mismatch rate
genomic relationship matrix
exclusion
Online Access:http://g3journal.org/lookup/doi/10.1534/g3.119.400501

Internet

http://g3journal.org/lookup/doi/10.1534/g3.119.400501

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