Evaluating de Novo Assembly and Binning Strategies for Time Series Drinking Water Metagenomes

ABSTRACT Reconstructing microbial genomes from metagenomic short-read data can be challenging due to the unknown and uneven complexity of microbial communities. This complexity encompasses highly diverse populations, which often includes strain variants. Reconstructing high-quality genomes is a cruc...

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Bibliographic Details
Main Authors: Solize Vosloo, Linxuan Huo, Christopher L. Anderson, Zihan Dai, Maria Sevillano, Ameet Pinto
Format: Article
Language:English
Published: American Society for Microbiology 2021-12-01
Series:Microbiology Spectrum
Subjects:
Online Access:https://journals.asm.org/doi/10.1128/Spectrum.01434-21