Nfinder: automatic inference of cell neighborhood in 2D and 3D using nuclear markers

Abstract Background In tissues and organisms, the coordination of neighboring cells is essential to maintain their properties and functions. Therefore, knowing which cells are adjacent is crucial to understand biological processes that involve physical interactions among them, e.g. cell migration an...

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Bibliographic Details
Main Authors: Bruno Moretti, Santiago N. Rodriguez Alvarez, Hernán E. Grecco
Format: Article
Language:English
Published: BMC 2023-06-01
Series:BMC Bioinformatics
Subjects:
Online Access:https://doi.org/10.1186/s12859-023-05284-2