Efficient inference of homologs in large eukaryotic pan-proteomes

Efficient inference of homologs in large eukaryotic pan-proteomes

Abstract Background Identification of homologous genes is fundamental to comparative genomics, functional genomics and phylogenomics. Extensive public homology databases are of great value for investigating homology but need to be continually updated to incorporate new sequences. As new sequences ar...

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Bibliographic Details
Main Authors: Siavash Sheikhizadeh Anari, Dick de Ridder, M. Eric Schranz, Sandra Smit
Format: Article
Language:English
Published: BMC 2018-09-01
Series:BMC Bioinformatics
Subjects:
Pan-genome
Protein similarity
Homologous genes
Orthology
k-mer
Online Access:http://link.springer.com/article/10.1186/s12859-018-2362-4

Internet

http://link.springer.com/article/10.1186/s12859-018-2362-4

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