Querying large read collections in main memory: a versatile data structure

<p>Abstract</p> <p>Background</p> <p>High Throughput Sequencing (HTS) is now heavily exploited for genome (re-) sequencing, metagenomics, epigenomics, and transcriptomics and requires different, but computer intensive bioinformatic analyses. When a reference genome is a...

Full description

Bibliographic Details
Main Authors: Lecroq Thierry, Salson Mikaël, Philippe Nicolas, Léonard Martine, Commes Thérèse, Rivals Eric
Format: Article
Language:English
Published: BMC 2011-06-01
Series:BMC Bioinformatics
Online Access:http://www.biomedcentral.com/1471-2105/12/242