MAVE-NN: learning genotype-phenotype maps from multiplex assays of variant effect

Abstract Multiplex assays of variant effect (MAVEs) are a family of methods that includes deep mutational scanning experiments on proteins and massively parallel reporter assays on gene regulatory sequences. Despite their increasing popularity, a general strategy for inferring quantitative models of...

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Bibliographic Details
Main Authors: Ammar Tareen, Mahdi Kooshkbaghi, Anna Posfai, William T. Ireland, David M. McCandlish, Justin B. Kinney
Format: Article
Language:English
Published: BMC 2022-04-01
Series:Genome Biology
Online Access:https://doi.org/10.1186/s13059-022-02661-7