Locality-sensitive bucketing functions for the edit distance

Abstract Background Many bioinformatics applications involve bucketing a set of sequences where each sequence is allowed to be assigned into multiple buckets. To achieve both high sensitivity and precision, bucketing methods are desired to assign similar sequences into the same bucket while assignin...

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Bibliographic Details
Main Authors: Ke Chen, Mingfu Shao
Format: Article
Language:English
Published: BMC 2023-07-01
Series:Algorithms for Molecular Biology
Subjects:
Online Access:https://doi.org/10.1186/s13015-023-00234-2