Scalable neighbour search and alignment with uvaia

Despite millions of SARS-CoV-2 genomes being sequenced and shared globally, manipulating such data sets is still challenging, especially selecting sequences for focused phylogenetic analysis. We present a novel method, uvaia, which is based on partial and exact sequence similarity for quickly extrac...

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Bibliographic Details
Main Authors: Leonardo de Oliveira Martins, Alison E. Mather, Andrew J. Page
Format: Article
Language:English
Published: PeerJ Inc. 2024-03-01
Series:PeerJ
Subjects:
Online Access:https://peerj.com/articles/16890.pdf