An automated phylogenetic tree-based small subunit rRNA taxonomy and alignment pipeline (STAP).

Comparative analysis of small-subunit ribosomal RNA (ss-rRNA) gene sequences forms the basis for much of what we know about the phylogenetic diversity of both cultured and uncultured microorganisms. As sequencing costs continue to decline and throughput increases, sequences of ss-rRNA genes are bein...

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Bibliographic Details
Main Authors: Dongying Wu, Amber Hartman, Naomi Ward, Jonathan A Eisen
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2008-07-01
Series:PLoS ONE
Online Access:https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/18596968/?tool=EBI