Comparing Multiple Locus Variable-Number Tandem Repeat Analyses with Whole-Genome Sequencing as Typing Method for Salmonella Enteritidis Surveillance in The Netherlands, January 2019 to March 2020

Comparing Multiple Locus Variable-Number Tandem Repeat Analyses with Whole-Genome Sequencing as Typing Method for Salmonella Enteritidis Surveillance in The Netherlands, January 2019 to March 2020

ABSTRACT In the Netherlands, whole-genome sequencing (WGS) was implemented as routine typing tool for Salmonella Enteritidis isolates in 2019. Multiple locus variable-number tandem repeat analyses (MLVA) was performed in parallel. The objective was to determine the concordance of MLVA and WGS as typ...

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Bibliographic Details
Main Authors: Roan Pijnacker, Maaike van den Beld, Kim van der Zwaluw, Anjo Verbruggen, Claudia Coipan, Alejandra Hernandez Segura, Lapo Mughini-Gras, Eelco Franz, Thijs Bosch
Format: Article
Language:English
Published: American Society for Microbiology 2022-10-01
Series:Microbiology Spectrum
Subjects:
Salmonella
clustering
multiple locus variable-number tandem repeat analyses
whole-genome sequencing
Online Access:https://journals.asm.org/doi/10.1128/spectrum.01375-22

Internet

https://journals.asm.org/doi/10.1128/spectrum.01375-22

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