Life Within a Contaminated Niche: Comparative Genomic Analyses of an Integrative Conjugative Element ICEnahCSV86 and Two Genomic Islands From Pseudomonas bharatica CSV86T Suggest Probable Role in Colonization and Adaptation

Life Within a Contaminated Niche: Comparative Genomic Analyses of an Integrative Conjugative Element ICEnahCSV86 and Two Genomic Islands From Pseudomonas bharatica CSV86T Suggest Probable Role in Colonization and Adaptation

Comparative genomic and functional analyses revealed the presence of three genomic islands (GIs, >50 Kb size): ICEnahCSV86, Pseudomonas bharatica genomic island-1 (PBGI-1), and PBGI-2 in the preferentially aromatic-degrading soil bacterium, Pseudomonas bharatica CSV86T. Site-specific genomic...

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Bibliographic Details
Main Authors: Balaram Mohapatra, Harshit Malhotra, Prashant S. Phale
Format: Article
Language:English
Published: Frontiers Media S.A. 2022-07-01
Series:Frontiers in Microbiology
Subjects:
Pseudomonas
integrative conjugative element (ICE)
comparative and functional genomics
phylogenomics
naphthalene metabolism
Co-Zn-Cd tolerance
Online Access:https://www.frontiersin.org/articles/10.3389/fmicb.2022.928848/full

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https://www.frontiersin.org/articles/10.3389/fmicb.2022.928848/full

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