Evaluating spatially variable gene detection methods for spatial transcriptomics data

Abstract Background The identification of genes that vary across spatial domains in tissues and cells is an essential step for spatial transcriptomics data analysis. Given the critical role it serves for downstream data interpretations, various methods for detecting spatially variable genes (SVGs) h...

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Bibliographic Details
Main Authors: Carissa Chen, Hani Jieun Kim, Pengyi Yang
Format: Article
Language:English
Published: BMC 2024-01-01
Series:Genome Biology
Online Access:https://doi.org/10.1186/s13059-023-03145-y