Characterization of the T cell receptor repertoire and melanoma tumor microenvironment upon combined treatment with ipilimumab and hTERT vaccination

Abstract Background This clinical trial evaluated a novel telomerase-targeting therapeutic cancer vaccine, UV1, in combination with ipilimumab, in patients with metastatic melanoma. Translational research was conducted on patient-derived blood and tissue samples with the goal of elucidating the effe...

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Main Authors: Espen Basmo Ellingsen, Gergana Bounova, Iliana Kerzeli, Irantzu Anzar, Donjete Simnica, Elin Aamdal, Tormod Guren, Trevor Clancy, Artur Mezheyeuski, Else Marit Inderberg, Sara M. Mangsbo, Mascha Binder, Eivind Hovig, Gustav Gaudernack
Format: Article
Language:English
Published: BMC 2022-09-01
Series:Journal of Translational Medicine
Subjects:
Online Access:https://doi.org/10.1186/s12967-022-03624-z
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author Espen Basmo Ellingsen
Gergana Bounova
Iliana Kerzeli
Irantzu Anzar
Donjete Simnica
Elin Aamdal
Tormod Guren
Trevor Clancy
Artur Mezheyeuski
Else Marit Inderberg
Sara M. Mangsbo
Mascha Binder
Eivind Hovig
Gustav Gaudernack
author_facet Espen Basmo Ellingsen
Gergana Bounova
Iliana Kerzeli
Irantzu Anzar
Donjete Simnica
Elin Aamdal
Tormod Guren
Trevor Clancy
Artur Mezheyeuski
Else Marit Inderberg
Sara M. Mangsbo
Mascha Binder
Eivind Hovig
Gustav Gaudernack
author_sort Espen Basmo Ellingsen
collection DOAJ
description Abstract Background This clinical trial evaluated a novel telomerase-targeting therapeutic cancer vaccine, UV1, in combination with ipilimumab, in patients with metastatic melanoma. Translational research was conducted on patient-derived blood and tissue samples with the goal of elucidating the effects of treatment on the T cell receptor repertoire and tumor microenvironment. Methods The trial was an open-label, single-center phase I/IIa study. Eligible patients had unresectable metastatic melanoma. Patients received up to 9 UV1 vaccinations and four ipilimumab infusions. Clinical responses were assessed according to RECIST 1.1. Patients were followed up for progression-free survival (PFS) and overall survival (OS). Whole-exome and RNA sequencing, and multiplex immunofluorescence were performed on the biopsies. T cell receptor (TCR) sequencing was performed on the peripheral blood and tumor tissues. Results Twelve patients were enrolled in the study. Vaccine-specific immune responses were detected in 91% of evaluable patients. Clinical responses were observed in four patients. The mPFS was 6.7 months, and the mOS was 66.3 months. There was no association between baseline tumor mutational burden, neoantigen load, IFN-γ gene signature, tumor-infiltrating lymphocytes, and response to therapy. Tumor telomerase expression was confirmed in all available biopsies. Vaccine-enriched TCR clones were detected in blood and biopsy, and an increase in the tumor IFN-γ gene signature was detected in clinically responding patients. Conclusion Clinical responses were observed irrespective of established predictive biomarkers for checkpoint inhibitor efficacy, indicating an added benefit of the vaccine-induced T cells. The clinical and immunological read-out warrants further investigation of UV1 in combination with checkpoint inhibitors. Trial registration Clinicaltrials.gov identifier: NCT02275416. Registered October 27, 2014. https://clinicaltrials.gov/ct2/show/NCT02275416?term=uv1&draw=2&rank=6
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spelling doaj.art-e47b5805c551439fb54758c8276abab02022-12-22T03:16:40ZengBMCJournal of Translational Medicine1479-58762022-09-0120111310.1186/s12967-022-03624-zCharacterization of the T cell receptor repertoire and melanoma tumor microenvironment upon combined treatment with ipilimumab and hTERT vaccinationEspen Basmo Ellingsen0Gergana Bounova1Iliana Kerzeli2Irantzu Anzar3Donjete Simnica4Elin Aamdal5Tormod Guren6Trevor Clancy7Artur Mezheyeuski8Else Marit Inderberg9Sara M. Mangsbo10Mascha Binder11Eivind Hovig12Gustav Gaudernack13Department of Tumor Biology, Institute for Cancer Research, The Norwegian Radium HospitalENPICOM B.V.Department of Pharmacy, Science for Life Laboratory, Uppsala UniversityNEC OncoimmunityDepartment for Internal Medicine IV - Hematology and Oncology, Universitätsklinikum Halle (Saale)Department of Oncology, Oslo University HospitalDepartment of Oncology, Oslo University HospitalNEC OncoimmunityHistoOne ABDepartment of Cellular Therapy, Oslo University HospitalDepartment of Pharmacy, Science for Life Laboratory, Uppsala UniversityDepartment for Internal Medicine IV - Hematology and Oncology, Universitätsklinikum Halle (Saale)Department of Tumor Biology, Institute for Cancer Research, The Norwegian Radium HospitalUltimovacs ASAAbstract Background This clinical trial evaluated a novel telomerase-targeting therapeutic cancer vaccine, UV1, in combination with ipilimumab, in patients with metastatic melanoma. Translational research was conducted on patient-derived blood and tissue samples with the goal of elucidating the effects of treatment on the T cell receptor repertoire and tumor microenvironment. Methods The trial was an open-label, single-center phase I/IIa study. Eligible patients had unresectable metastatic melanoma. Patients received up to 9 UV1 vaccinations and four ipilimumab infusions. Clinical responses were assessed according to RECIST 1.1. Patients were followed up for progression-free survival (PFS) and overall survival (OS). Whole-exome and RNA sequencing, and multiplex immunofluorescence were performed on the biopsies. T cell receptor (TCR) sequencing was performed on the peripheral blood and tumor tissues. Results Twelve patients were enrolled in the study. Vaccine-specific immune responses were detected in 91% of evaluable patients. Clinical responses were observed in four patients. The mPFS was 6.7 months, and the mOS was 66.3 months. There was no association between baseline tumor mutational burden, neoantigen load, IFN-γ gene signature, tumor-infiltrating lymphocytes, and response to therapy. Tumor telomerase expression was confirmed in all available biopsies. Vaccine-enriched TCR clones were detected in blood and biopsy, and an increase in the tumor IFN-γ gene signature was detected in clinically responding patients. Conclusion Clinical responses were observed irrespective of established predictive biomarkers for checkpoint inhibitor efficacy, indicating an added benefit of the vaccine-induced T cells. The clinical and immunological read-out warrants further investigation of UV1 in combination with checkpoint inhibitors. Trial registration Clinicaltrials.gov identifier: NCT02275416. Registered October 27, 2014. https://clinicaltrials.gov/ct2/show/NCT02275416?term=uv1&draw=2&rank=6https://doi.org/10.1186/s12967-022-03624-zCancerImmunotherapyTherapeutic Cancer VaccineTelomerasehTERTMelanoma
spellingShingle Espen Basmo Ellingsen
Gergana Bounova
Iliana Kerzeli
Irantzu Anzar
Donjete Simnica
Elin Aamdal
Tormod Guren
Trevor Clancy
Artur Mezheyeuski
Else Marit Inderberg
Sara M. Mangsbo
Mascha Binder
Eivind Hovig
Gustav Gaudernack
Characterization of the T cell receptor repertoire and melanoma tumor microenvironment upon combined treatment with ipilimumab and hTERT vaccination
Journal of Translational Medicine
Cancer
Immunotherapy
Therapeutic Cancer Vaccine
Telomerase
hTERT
Melanoma
title Characterization of the T cell receptor repertoire and melanoma tumor microenvironment upon combined treatment with ipilimumab and hTERT vaccination
title_full Characterization of the T cell receptor repertoire and melanoma tumor microenvironment upon combined treatment with ipilimumab and hTERT vaccination
title_fullStr Characterization of the T cell receptor repertoire and melanoma tumor microenvironment upon combined treatment with ipilimumab and hTERT vaccination
title_full_unstemmed Characterization of the T cell receptor repertoire and melanoma tumor microenvironment upon combined treatment with ipilimumab and hTERT vaccination
title_short Characterization of the T cell receptor repertoire and melanoma tumor microenvironment upon combined treatment with ipilimumab and hTERT vaccination
title_sort characterization of the t cell receptor repertoire and melanoma tumor microenvironment upon combined treatment with ipilimumab and htert vaccination
topic Cancer
Immunotherapy
Therapeutic Cancer Vaccine
Telomerase
hTERT
Melanoma
url https://doi.org/10.1186/s12967-022-03624-z
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