Molecular modelling of the FOXO4-TP53 interaction to design senolytic peptides for the elimination of senescent cancer cells

Background: Senescent cells accumulate in tissues over time as part of the natural ageing process and the removal of senescent cells has shown promise for alleviating many different age-related diseases in mice. Cancer is an age-associated disease and there are numerous mechanisms driving cellular s...

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Main Authors: Hillary H. Le, Suleyman S. Cinaroglu, Elise C. Manalo, Aysegul Ors, Michelle M. Gomes, Burcin Duan Sahbaz, Karla Bonic, Carlos A. Origel Marmolejo, Arnaud Quentel, Justin S. Plaut, Taryn E. Kawashima, E. Sila Ozdemir, Sanjay V. Malhotra, Yavuz Ahiska, Ugur Sezerman, Gunseli Bayram Akcapinar, Joshua C. Saldivar, Emel Timucin, Jared M. Fischer
Format: Article
Language:English
Published: Elsevier 2021-11-01
Series:EBioMedicine
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2352396421004394
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author Hillary H. Le
Suleyman S. Cinaroglu
Elise C. Manalo
Aysegul Ors
Michelle M. Gomes
Burcin Duan Sahbaz
Karla Bonic
Carlos A. Origel Marmolejo
Arnaud Quentel
Justin S. Plaut
Taryn E. Kawashima
E. Sila Ozdemir
Sanjay V. Malhotra
Yavuz Ahiska
Ugur Sezerman
Gunseli Bayram Akcapinar
Joshua C. Saldivar
Emel Timucin
Jared M. Fischer
author_facet Hillary H. Le
Suleyman S. Cinaroglu
Elise C. Manalo
Aysegul Ors
Michelle M. Gomes
Burcin Duan Sahbaz
Karla Bonic
Carlos A. Origel Marmolejo
Arnaud Quentel
Justin S. Plaut
Taryn E. Kawashima
E. Sila Ozdemir
Sanjay V. Malhotra
Yavuz Ahiska
Ugur Sezerman
Gunseli Bayram Akcapinar
Joshua C. Saldivar
Emel Timucin
Jared M. Fischer
author_sort Hillary H. Le
collection DOAJ
description Background: Senescent cells accumulate in tissues over time as part of the natural ageing process and the removal of senescent cells has shown promise for alleviating many different age-related diseases in mice. Cancer is an age-associated disease and there are numerous mechanisms driving cellular senescence in cancer that can be detrimental to recovery. Thus, it would be beneficial to develop a senolytic that acts not only on ageing cells but also senescent cancer cells to prevent cancer recurrence or progression. Methods: We used molecular modelling to develop a series of rationally designed peptides to mimic and target FOXO4 disrupting the FOXO4-TP53 interaction and releasing TP53 to induce apoptosis. We then tested these peptides as senolytic agents for the elimination of senescent cells both in cell culture and in vivo. Findings: Here we show that these peptides can act as senolytics for eliminating senescent human cancer cells both in cell culture and in orthotopic mouse models. We then further characterized one peptide, ES2, showing that it disrupts FOXO4-TP53 foci, activates TP53 mediated apoptosis and preferentially binds FOXO4 compared to TP53. Next, we show that intratumoural delivery of ES2 plus a BRAF inhibitor results in a significant increase in apoptosis and a survival advantage in mouse models of melanoma. Finally, we show that repeated systemic delivery of ES2 to older mice results in reduced senescent cell numbers in the liver with minimal toxicity. Interpretation: Taken together, our results reveal that peptides can be generated to specifically target and eliminate FOXO4+ senescent cancer cells, which has implications for eradicating residual disease and as a combination therapy for frontline treatment of cancer. Funding: This work was supported by the Cancer Early Detection Advanced Research Center at Oregon Health & Science University.
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spelling doaj.art-e47bd46165a546c3a103052aa9b581992022-12-21T20:45:07ZengElsevierEBioMedicine2352-39642021-11-0173103646Molecular modelling of the FOXO4-TP53 interaction to design senolytic peptides for the elimination of senescent cancer cellsHillary H. Le0Suleyman S. Cinaroglu1Elise C. Manalo2Aysegul Ors3Michelle M. Gomes4Burcin Duan Sahbaz5Karla Bonic6Carlos A. Origel Marmolejo7Arnaud Quentel8Justin S. Plaut9Taryn E. Kawashima10E. Sila Ozdemir11Sanjay V. Malhotra12Yavuz Ahiska13Ugur Sezerman14Gunseli Bayram Akcapinar15Joshua C. Saldivar16Emel Timucin17Jared M. Fischer18Cancer Early Detection Advanced Research Center, Knight Cancer Institute, Oregon Health & Science University, USAInstitute of Health Sciences, Acibadem Mehmet Ali Aydinlar University, Atasehir Istanbul 34752, Turkey; Eternans Ltd., UKCancer Early Detection Advanced Research Center, Knight Cancer Institute, Oregon Health & Science University, USACancer Early Detection Advanced Research Center, Knight Cancer Institute, Oregon Health & Science University, USACancer Early Detection Advanced Research Center, Knight Cancer Institute, Oregon Health & Science University, USAEternans Ltd., UKCancer Early Detection Advanced Research Center, Knight Cancer Institute, Oregon Health & Science University, USACancer Early Detection Advanced Research Center, Knight Cancer Institute, Oregon Health & Science University, USACancer Early Detection Advanced Research Center, Knight Cancer Institute, Oregon Health & Science University, USACancer Early Detection Advanced Research Center, Knight Cancer Institute, Oregon Health & Science University, USA; Dept of Bioengineering, University of California San Diego, USACancer Early Detection Advanced Research Center, Knight Cancer Institute, Oregon Health & Science University, USACancer Early Detection Advanced Research Center, Knight Cancer Institute, Oregon Health & Science University, USACancer Early Detection Advanced Research Center, Knight Cancer Institute, Oregon Health & Science University, USA; Dept of Cell, Developmental and Cancer Biology, Oregon Health & Science University, USAEternans Ltd., UKEternans Ltd., UK; School of Medicine, Acibadem Mehmet Ali Aydinlar University, Atasehir Istanbul 34752, TurkeyInstitute of Health Sciences, Acibadem Mehmet Ali Aydinlar University, Atasehir Istanbul 34752, Turkey; Eternans Ltd., UKCancer Early Detection Advanced Research Center, Knight Cancer Institute, Oregon Health & Science University, USA; Division of Oncological Sciences, Knight Cancer Institute, Oregon Health & Science University, USAEternans Ltd., UK; School of Medicine, Acibadem Mehmet Ali Aydinlar University, Atasehir Istanbul 34752, TurkeyCancer Early Detection Advanced Research Center, Knight Cancer Institute, Oregon Health & Science University, USA; Dept of Molecular and Medical Genetics, Oregon Health & Science University, USA; Corresponding author.Background: Senescent cells accumulate in tissues over time as part of the natural ageing process and the removal of senescent cells has shown promise for alleviating many different age-related diseases in mice. Cancer is an age-associated disease and there are numerous mechanisms driving cellular senescence in cancer that can be detrimental to recovery. Thus, it would be beneficial to develop a senolytic that acts not only on ageing cells but also senescent cancer cells to prevent cancer recurrence or progression. Methods: We used molecular modelling to develop a series of rationally designed peptides to mimic and target FOXO4 disrupting the FOXO4-TP53 interaction and releasing TP53 to induce apoptosis. We then tested these peptides as senolytic agents for the elimination of senescent cells both in cell culture and in vivo. Findings: Here we show that these peptides can act as senolytics for eliminating senescent human cancer cells both in cell culture and in orthotopic mouse models. We then further characterized one peptide, ES2, showing that it disrupts FOXO4-TP53 foci, activates TP53 mediated apoptosis and preferentially binds FOXO4 compared to TP53. Next, we show that intratumoural delivery of ES2 plus a BRAF inhibitor results in a significant increase in apoptosis and a survival advantage in mouse models of melanoma. Finally, we show that repeated systemic delivery of ES2 to older mice results in reduced senescent cell numbers in the liver with minimal toxicity. Interpretation: Taken together, our results reveal that peptides can be generated to specifically target and eliminate FOXO4+ senescent cancer cells, which has implications for eradicating residual disease and as a combination therapy for frontline treatment of cancer. Funding: This work was supported by the Cancer Early Detection Advanced Research Center at Oregon Health & Science University.http://www.sciencedirect.com/science/article/pii/S2352396421004394SenolyticFOXO4TP53Cancer
spellingShingle Hillary H. Le
Suleyman S. Cinaroglu
Elise C. Manalo
Aysegul Ors
Michelle M. Gomes
Burcin Duan Sahbaz
Karla Bonic
Carlos A. Origel Marmolejo
Arnaud Quentel
Justin S. Plaut
Taryn E. Kawashima
E. Sila Ozdemir
Sanjay V. Malhotra
Yavuz Ahiska
Ugur Sezerman
Gunseli Bayram Akcapinar
Joshua C. Saldivar
Emel Timucin
Jared M. Fischer
Molecular modelling of the FOXO4-TP53 interaction to design senolytic peptides for the elimination of senescent cancer cells
EBioMedicine
Senolytic
FOXO4
TP53
Cancer
title Molecular modelling of the FOXO4-TP53 interaction to design senolytic peptides for the elimination of senescent cancer cells
title_full Molecular modelling of the FOXO4-TP53 interaction to design senolytic peptides for the elimination of senescent cancer cells
title_fullStr Molecular modelling of the FOXO4-TP53 interaction to design senolytic peptides for the elimination of senescent cancer cells
title_full_unstemmed Molecular modelling of the FOXO4-TP53 interaction to design senolytic peptides for the elimination of senescent cancer cells
title_short Molecular modelling of the FOXO4-TP53 interaction to design senolytic peptides for the elimination of senescent cancer cells
title_sort molecular modelling of the foxo4 tp53 interaction to design senolytic peptides for the elimination of senescent cancer cells
topic Senolytic
FOXO4
TP53
Cancer
url http://www.sciencedirect.com/science/article/pii/S2352396421004394
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