Design and use of a back splicing junction probe for pulldown of circular RNA-binding proteins in cell lines

Summary: Due to the unique structure of circular RNAs, it is challenging to use traditional pulldown approaches. Here, we describe the design and use of a probe that spans the back splicing junction (BSJ), enabling interaction with circular RNAs. The probe repeats four times, allowing efficient and...

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Bibliographic Details
Main Authors: Feiya Li, Nan Wu, Qiwei Yang, William W. Du, Javeria Qadir, Burton B. Yang
Format: Article
Language:English
Published: Elsevier 2022-12-01
Series:STAR Protocols
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2666166722005822