Aromatic amino acid metabolites alter interferon signaling and influenza pathogenesis

The ability of gut microbial metabolites to influence the host is increasingly recognized. The microbiota extensively metabolizes the three aromatic amino acids, tryptophan, tyrosine, and phenylalanine. Previously we have found that a metabolite of tyrosine, 4-OH-phenylpropionic acid, can enhance ty...

Full description

Bibliographic Details
Main Authors: Gautam Anand, Colin Clark-Dinovo, Alexandra M. Perry, Victoria M. Goodwin, Emma St. Raymond, Sonia Sakleshpur, Ashley L. Steed
Format: Article
Language:English
Published: Frontiers Media S.A. 2024-01-01
Series:Frontiers in Molecular Biosciences
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fmolb.2023.1232573/full
_version_ 1797348588583387136
author Gautam Anand
Colin Clark-Dinovo
Alexandra M. Perry
Victoria M. Goodwin
Emma St. Raymond
Sonia Sakleshpur
Ashley L. Steed
author_facet Gautam Anand
Colin Clark-Dinovo
Alexandra M. Perry
Victoria M. Goodwin
Emma St. Raymond
Sonia Sakleshpur
Ashley L. Steed
author_sort Gautam Anand
collection DOAJ
description The ability of gut microbial metabolites to influence the host is increasingly recognized. The microbiota extensively metabolizes the three aromatic amino acids, tryptophan, tyrosine, and phenylalanine. Previously we have found that a metabolite of tyrosine, 4-OH-phenylpropionic acid, can enhance type I interferon (IFN) signaling and protect from influenza pathogenesis in a murine model. Herein we screened 17 related aromatic amino acid metabolites for effects on IFN signaling in human lung epithelial cells and monocytes alone and in the presence of IFN-β, influenza, and LPS. While the tryptophan family metabolites reduced IFN signaling in both cell types, the tyrosine and phenylalanine metabolites had varied effects, which were cell-type dependent. Pooled treatment of all these metabolites reduced IFN signaling in both cell types and suggested a tryptophan metabolite effect dominance. Strikingly, when all the metabolites were pooled together, we found reduced influenza recovery in both cell types. RNA sequencing further validated reduced viral loads and decreased IFN signaling. Single gene silencing of significantly upregulated genes identified by RNA sequencing (EGR2, ATP6VD02, SPOCK1, and IL31RA) did not completely abrogate the metabolite induced decrease in IFN signaling. However, these upregulated targets suggested a mechanistic link to TGF-beta signaling. Treatment with a TGF-beta inhibitor and combined targeted gene silencing led to a significant reversal of metabolite induced IFN signaling suppression. Finally, we demonstrated that intranasal administration of these metabolites prior to influenza infection led to reduced animal morbidity, viral titers, and inflammation. Our work implies that microbial metabolites can alter IFN signaling mechanistically through TGF-beta and promote beneficial outcomes during influenza infection.
first_indexed 2024-03-08T12:08:11Z
format Article
id doaj.art-e6e78684dd5e4df0a64c8e951f87b3b0
institution Directory Open Access Journal
issn 2296-889X
language English
last_indexed 2024-03-08T12:08:11Z
publishDate 2024-01-01
publisher Frontiers Media S.A.
record_format Article
series Frontiers in Molecular Biosciences
spelling doaj.art-e6e78684dd5e4df0a64c8e951f87b3b02024-01-23T04:44:56ZengFrontiers Media S.A.Frontiers in Molecular Biosciences2296-889X2024-01-011010.3389/fmolb.2023.12325731232573Aromatic amino acid metabolites alter interferon signaling and influenza pathogenesisGautam AnandColin Clark-DinovoAlexandra M. PerryVictoria M. GoodwinEmma St. RaymondSonia SakleshpurAshley L. SteedThe ability of gut microbial metabolites to influence the host is increasingly recognized. The microbiota extensively metabolizes the three aromatic amino acids, tryptophan, tyrosine, and phenylalanine. Previously we have found that a metabolite of tyrosine, 4-OH-phenylpropionic acid, can enhance type I interferon (IFN) signaling and protect from influenza pathogenesis in a murine model. Herein we screened 17 related aromatic amino acid metabolites for effects on IFN signaling in human lung epithelial cells and monocytes alone and in the presence of IFN-β, influenza, and LPS. While the tryptophan family metabolites reduced IFN signaling in both cell types, the tyrosine and phenylalanine metabolites had varied effects, which were cell-type dependent. Pooled treatment of all these metabolites reduced IFN signaling in both cell types and suggested a tryptophan metabolite effect dominance. Strikingly, when all the metabolites were pooled together, we found reduced influenza recovery in both cell types. RNA sequencing further validated reduced viral loads and decreased IFN signaling. Single gene silencing of significantly upregulated genes identified by RNA sequencing (EGR2, ATP6VD02, SPOCK1, and IL31RA) did not completely abrogate the metabolite induced decrease in IFN signaling. However, these upregulated targets suggested a mechanistic link to TGF-beta signaling. Treatment with a TGF-beta inhibitor and combined targeted gene silencing led to a significant reversal of metabolite induced IFN signaling suppression. Finally, we demonstrated that intranasal administration of these metabolites prior to influenza infection led to reduced animal morbidity, viral titers, and inflammation. Our work implies that microbial metabolites can alter IFN signaling mechanistically through TGF-beta and promote beneficial outcomes during influenza infection.https://www.frontiersin.org/articles/10.3389/fmolb.2023.1232573/fullmicrobiotamicrobial metabolitesinterferoninflammationinfluenza
spellingShingle Gautam Anand
Colin Clark-Dinovo
Alexandra M. Perry
Victoria M. Goodwin
Emma St. Raymond
Sonia Sakleshpur
Ashley L. Steed
Aromatic amino acid metabolites alter interferon signaling and influenza pathogenesis
Frontiers in Molecular Biosciences
microbiota
microbial metabolites
interferon
inflammation
influenza
title Aromatic amino acid metabolites alter interferon signaling and influenza pathogenesis
title_full Aromatic amino acid metabolites alter interferon signaling and influenza pathogenesis
title_fullStr Aromatic amino acid metabolites alter interferon signaling and influenza pathogenesis
title_full_unstemmed Aromatic amino acid metabolites alter interferon signaling and influenza pathogenesis
title_short Aromatic amino acid metabolites alter interferon signaling and influenza pathogenesis
title_sort aromatic amino acid metabolites alter interferon signaling and influenza pathogenesis
topic microbiota
microbial metabolites
interferon
inflammation
influenza
url https://www.frontiersin.org/articles/10.3389/fmolb.2023.1232573/full
work_keys_str_mv AT gautamanand aromaticaminoacidmetabolitesalterinterferonsignalingandinfluenzapathogenesis
AT colinclarkdinovo aromaticaminoacidmetabolitesalterinterferonsignalingandinfluenzapathogenesis
AT alexandramperry aromaticaminoacidmetabolitesalterinterferonsignalingandinfluenzapathogenesis
AT victoriamgoodwin aromaticaminoacidmetabolitesalterinterferonsignalingandinfluenzapathogenesis
AT emmastraymond aromaticaminoacidmetabolitesalterinterferonsignalingandinfluenzapathogenesis
AT soniasakleshpur aromaticaminoacidmetabolitesalterinterferonsignalingandinfluenzapathogenesis
AT ashleylsteed aromaticaminoacidmetabolitesalterinterferonsignalingandinfluenzapathogenesis