Richness estimation in microbiome data obtained from denoising pipelines

The quantification of richness within a sample—either measured as the number of observed species or approximated by estimation—is a common first step in microbiome studies and is known to be highly dependent on sequencing depth, which itself is highly variable between samples. Rarefaction curves ser...

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Bibliographic Details
Main Authors: Sven Kleine Bardenhorst, Marius Vital, André Karch, Nicole Rübsamen
Format: Article
Language:English
Published: Elsevier 2022-01-01
Series:Computational and Structural Biotechnology Journal
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2001037021005456