Transposable element subfamily annotation has a reproducibility problem

Abstract Background Transposable element (TE) sequences are classified into families based on the reconstructed history of replication, and into subfamilies based on more fine-grained features that are often intended to capture family history. We evaluate the reliability of annotation with common su...

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Bibliographic Details
Main Authors: Kaitlin M. Carey, Gilia Patterson, Travis J. Wheeler
Format: Article
Language:English
Published: BMC 2021-01-01
Series:Mobile DNA
Subjects:
Online Access:https://doi.org/10.1186/s13100-021-00232-4