Evaluation of STAR and Kallisto on Single Cell RNA-Seq Data Alignment

Alignment of scRNA-Seq data are the first and one of the most critical steps of the scRNA-Seq analysis workflow, and thus the choice of proper aligners is of paramount importance. Recently, STAR an alignment method and Kallisto a pseudoalignment method have both gained a vast amount of popularity in...

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Bibliographic Details
Main Authors: Yuheng Du, Qianhui Huang, Cedric Arisdakessian, Lana X. Garmire
Format: Article
Language:English
Published: Oxford University Press 2020-05-01
Series:G3: Genes, Genomes, Genetics
Subjects:
Online Access:http://g3journal.org/lookup/doi/10.1534/g3.120.401160