FindIT2: an R/Bioconductor package to identify influential transcription factor and targets based on multi-omics data

FindIT2: an R/Bioconductor package to identify influential transcription factor and targets based on multi-omics data

Abstract Background Transcription factors (TFs) play central roles in regulating gene expression. With the rapid growth in the use of high-throughput sequencing methods, there is a need to develop a comprehensive data processing and analyzing framework for inferring influential TFs based on ChIP-seq...

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Bibliographic Details
Main Authors: Guan-Dong Shang, Zhou-Geng Xu, Mu-Chun Wan, Fu-Xiang Wang, Jia-Wei Wang
Format: Article
Language:English
Published: BMC 2022-04-01
Series:BMC Genomics
Subjects:
Transcription factor
Gene regulation
Chromatin accessibility
ATAC-seq
ChIP-seq
R package
Online Access:https://doi.org/10.1186/s12864-022-08506-8

Internet

https://doi.org/10.1186/s12864-022-08506-8

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