Contribution of RdDM to the ecotype-specific differential methylation on conserved as well as highly variable regions between Arabidopsis ecotypes

Contribution of RdDM to the ecotype-specific differential methylation on conserved as well as highly variable regions between Arabidopsis ecotypes

Abstract Background Several studies showed genome-wide DNA methylation during Arabidopsis embryogenesis and germination. Although it has been known that the change of DNA methylation mainly occurs at CHH context mediated by small RNA-directed DNA methylation pathway during seed ripening and germinat...

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Main Authors: Jaehoon Lee, Sang-Yoon Shin, Sang-Kyu Lee, Kyunghyuk Park, Haechan Gill, Youbong Hyun, Choongwon Jeong, Jong-Seong Jeon, Chanseok Shin, Yeonhee Choi
Format: Article
Language:English
Published: BMC 2023-01-01
Series:BMC Genomics
Subjects:
Arabidopsis
Methylome
Transposable elements (TEs)
Structural variation
RNA-directed DNA methylation (RdDM)
Online Access:https://doi.org/10.1186/s12864-023-09128-4

Internet

https://doi.org/10.1186/s12864-023-09128-4

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