Tubule-U-Net: a novel dataset and deep learning-based tubule segmentation framework in whole slide images of breast cancer

Abstract The tubule index is a vital prognostic measure in breast cancer tumor grading and is visually evaluated by pathologists. In this paper, a computer-aided patch-based deep learning tubule segmentation framework, named Tubule-U-Net, is developed and proposed to segment tubules in Whole Slide I...

Full description

Bibliographic Details
Main Authors: Eren Tekin, Çisem Yazıcı, Huseyin Kusetogullari, Fatma Tokat, Amir Yavariabdi, Leonardo Obinna Iheme, Sercan Çayır, Engin Bozaba, Gizem Solmaz, Berkan Darbaz, Gülşah Özsoy, Samet Ayaltı, Cavit Kerem Kayhan, Ümit İnce, Burak Uzel
Format: Article
Language:English
Published: Nature Portfolio 2023-01-01
Series:Scientific Reports
Online Access:https://doi.org/10.1038/s41598-022-27331-3